Disease: Lupus Erythematosus, Systemic
Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs12863738 0.724 0.240 X 136949968 intron variant C/T snv 0.16 14
rs2807264 0.724 0.240 X 136583619 downstream gene variant C/A snv 14
rs2836882 0.724 0.240 21 39094644 intergenic variant G/A snv 0.23 15
rs2738774 0.724 0.240 20 63637985 downstream gene variant G/A;C snv 14
rs602662
LOC105447645 ; FUT2
0.716 0.280 19 48703728 missense variant G/A snv 0.40 0.47 15
rs62131887 0.724 0.240 19 10476920 intergenic variant C/T snv 0.37 14
rs12232497 0.701 0.360 17 39883866 intergenic variant T/C snv 0.35 15
rs11117431 0.807 0.160 16 85981710 intron variant A/G snv 0.18 6
rs117372389
NKD1
0.724 0.240 16 50634166 3 prime UTR variant G/T snv 1.1E-02 14
rs12598357 0.724 0.240 16 28329624 intergenic variant A/G snv 0.43 15
rs12928404
ATXN2L
0.724 0.240 16 28835925 splice region variant T/C snv 0.44 0.45 15
rs77150043
ADCY7
0.724 0.240 16 50270338 intron variant C/T snv 0.17 14
rs72743477
SMAD3
0.724 0.240 15 67171953 intron variant A/G snv 0.17 14
rs11839053 0.724 0.240 13 106410694 intergenic variant T/C snv 7.0E-02 14
rs1689510
SUOX
0.724 0.240 12 56002984 non coding transcript exon variant G/C snv 0.25 16
rs17466626
LOC105369736 ; LRRK2
0.724 0.240 12 40366829 non coding transcript exon variant A/G snv 1.7E-02 14
rs17885785
IGF2 ; IGF2-AS ; INS-IGF2
0.724 0.240 11 2146620 non coding transcript exon variant C/T snv 0.14 14
rs10822050 0.724 0.240 10 62679011 downstream gene variant T/C snv 0.33 14
rs1250563
ZMIZ1
0.724 0.240 10 79287626 intron variant G/C snv 0.24 14
rs1332099 0.724 0.240 10 99538694 downstream gene variant T/C;G snv 14
rs706778
IL2RA
0.695 0.320 10 6056986 intron variant C/T snv 0.46 15
rs7100025
ANKRD30A ; LINC00993
0.724 0.240 10 37303610 intron variant G/A snv 0.68 14
rs10988542
FNBP1
0.724 0.240 9 129894985 intron variant G/A;C snv 14
rs11145763
CARD9
0.724 0.240 9 136369144 intron variant A/C;G;T snv 14
rs36051895 0.716 0.240 9 4981866 upstream gene variant G/T snv 0.25 15